lundi 17 juillet 2017

rand() from lmerTest: how to deal with missing values?

I am working with a large dataset and analyzing a continuous dependent variable with a linear mixed effects model using the R package lme4. I am also using the extension lmerTest, which allows to compute various plots and the p-values associated with fixed and random terms.

When I run the rand() to obtain a p-value associated with each random term, I obtain the following error:

Error in anova.merMod(object = object, ... = ...) : models were not all fitted to the same size of dataset

This is because one of my random terms includes missing values, while others don't.

My question is: within the rand function, how can I deal with differences in dataset sizes? Is there an argument that allows to automatically omit NAs? I tried to look at the help page for that function but the documentation is very limited.

Thanks!




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